Scientific Publications

Puente, L. D. G.; Gross, E.; Harrington, H. A.; Johnston, M.; Meshkat, N.; Millan, M. P.; Shiu, A.: Absolute concentration robustness: Algebra and geometry. Journal of Symbolic Computation 128, 102398, p. 1 - 1 (2025)

Grapin-Botton, A.; Loh, J. Y.-H.: Editorial overview: Regaining architecture and cell cross-talk upon regeneration. Current opinion in genetics & development 91, 102302 (2025)

Deis, R.; Lerer-Goldshtein, T.; Baiko, O.; Eyal, Z.; Brenman-Begin, D.; Goldsmith, M.; Kaufmann, S.; Heinig, U.; Dong, Y.; Lushchekina, S. et al.; Varsano, N.; Olender, T.; Kupervaser, M.; Porat, Z.; Levin-Zaidman, S.; Pinkas, I.; Mateus, R.; Gur, D.: Genetic control over biogenic crystal morphogenesis in zebrafish. Nature chemical biology 21 (3), pp. 383 - 392 (2025)

Byrne, H. M.; Harrington, H. A.; Ovchinnikov, A.; Pogudin, G.; Rahkooy, H.; Soto, P.: Algebraic identifiability of partial differential equation models. NONLINEARITY 38 (2), 025022 (2025)

Hilgers, L.; Liu, S.; Jensen, A.; Brown, T.; Cousins, T.; Schweiger, R.; Guschanski, K.; Hiller, M.: Avoidable false PSMC population size peaks occur across numerous studies. Current biology: CB 35 (4), pp. 927 - 930 (2025)

Devlin, M. R.; Kim, S.; Campàs, O.; Hawkes, E. W.: Material-like robotic collectives with spatiotemporal control of strength and shape. Science (New York, N.Y.) 387 (6736), pp. 880 - 885 (2025)

Stooke-Vaughan, G. A.; Kim, S.; Yen, S.-T.; Son, K.; Banavar, S. P.; Giammona, J.; Kimelman, D.; Campàs, O.: The physical roles of different posterior tissues in zebrafish axis elongation. Nature communications 16 (1), 1839 (2025)

Verde, E. M.; Antoniani, F.; Mediani, L.; Secco, V.; Crotti, S.; Ferrara, M. C.; Vinet, J.; Sergeeva, A.; Yan, X.; Hoege, C. et al.; Stuani, C.; Paron, F.; Kao, T.-T.; Shrivastava, R.; Polanowska, J.; Bailly, A.; Rosa, A.; Aronica, E.; Goswami, A.; Shneider, N.; Hyman, A.; Buratti, E.; Xirodimas, D.; Franzmann, T.; Alberti, S.; Carra, S.: SUMO2/3 conjugation of TDP-43 protects against aggregation. Science advances 11 (8), 2475 (2025)

Zechner, C.; Jülicher, F.: Concentration buffering and noise reduction in non-equilibrium phase-separating systems. Cell systems 16 (2), 101168 (2025)

Genthon, A.; Modes, C. D.; Jülicher, F.; Grill, S. W.: Nonequilibrium Transitions in a Template Copying Ensemble. Physical review letters 134 (6), 68402 (2025)

Brown, T.; Mishra, K.; Elewa, A.; Iarovenko, S.; Subramanian, E.; Araus, A. J.; Petzold, A.; Fromm, B.; Friedländer, M. R.; Rikk, L. et al.; Suzuki, M.; Suzuki, K.-I. T.; Hayashi, T.; Toyoda, A.; Oliveira, C.; Osipova, E.; Leigh, N. D.; Yun, M. H.; Simon, A.: Chromosome-scale genome assembly reveals how repeat elements shape non-coding RNA landscapes active during newt limb regeneration. Cell genomics 5 (2), 100761 (2025)

Bein, B.; Chrysostomakis, I.; Arantes, L. S.; Brown, T.; Gerheim, C.; Schell, T.; Schneider, C.; Leushkin, E.; Chen, Z.; Sigwart, J. et al.; Gonzalez, V.; Wong, N. L. W. S.; Santos, F. R.; Blom, M. P. K.; Mayer, F.; Mazzoni, C. J.; Böhne, A.; Winkler, S.; Greve, C.; Hiller, M.: Long-read sequencing and genome assembly of natural history collection samples and challenging specimens. Genome biology 26 (1), 25 (2025)

Xu, Y.; Chao, A.; Rinaldin, M.; Kickuth, A.; Brugués, J.; Talia, S. D.: The cell cycle oscillator and spindle length set the speed of chromosome separation in Drosophila embryos. Current biology: CB 35 (3), pp. 655 - 664 (2025)

Morales, A. E.; Dong, Y.; Brown, T.; Baid, K.; Kontopoulos, D.-G.; Gonzalez, V.; Huang, Z.; Ahmed, A.-W.; Bhuinya, A.; Hilgers, L. et al.; Winkler, S.; Hughes, G. M.; Li, X.; Lu, P.; Yang, Y.; Kirilenko, B.; Devanna, P.; Lama, T. M.; Nissan, Y.; Pippel, M.; Dávalos, L. M.; Vernes, S.; Puechmaille, S. J.; Rossiter, S. J.; Yovel, Y.; Prescott, J. B.; Kurth, A.; Ray, D. A.; Lim, B. K.; Myers, E. W.; Teeling, E.; Banerjee, A.; Irving, A. T.; Hiller, M.: Bat genomes illuminate adaptations to viral tolerance and disease resistance. Nature 638 (8050), pp. 449 - 458 (2025)

Yin, M. D.; Lemaire, O. N.; Jiménez, J. G. R.; Belhamri, M.; Shevchenko, A.; Hummer, G.; Wagner, T.; Murphy, B. J.: Conformational dynamics of a multienzyme complex in anaerobic carbon fixation. Science (New York, N.Y.) 387 (6733), pp. 498 - 504 (2025)

Das, S.; Parigi, S. M.; Luo, X.; Fransson, J.; Kern, B. C.; Okhovat, A.; Diaz, O. E.; Sorini, C.; Czarnewski, P.; Webb, A. T. et al.; Morales, R. A.; Lebon, S.; Monasterio, G.; Castillo, F.; Tripathi, K. P.; He, N.; Pelczar, P.; Schaltenberg, N.; Fuente, M. D. l.; López-Köstner, F.; Nylén, S.; Larsen, H. L.; Kuiper, R.; Antonson, P.; Hermoso, M. A.; Huber, S.; Biton, M.; Scharaw, S.; Gustafsson, J.-Å.; Katajisto, P.; Villablanca, E. J.: Liver X receptor unlinks intestinal regeneration and tumorigenesis. Nature 637 (8048), pp. 1198 - 1206 (2025)

Chhatre, A.; Stepanek, L.; Nievergelt, A. P.; Viar, G. A.; Diez, S.; Pigino, G.: Tubulin tyrosination/detyrosination regulate the affinity and sorting of intraflagellar transport trains on axonemal microtubule doublets. Nature communications 16 (1), 1055 (2025)

Haas, P. A.; Höhn, S. S. M. H.: Cut it out: Out-of-plane stresses in cell sheet folding of Volvox embryos. Physical review. E 111, 14420 (2025)

Brumm, A. S.; McCarthy, A.; Gerri, C.; Fallesen, T.; Woods, L.; McMahon, R.; Papathanasiou, A.; Elder, K.; Snell, P.; Christie, L. et al.; Garcia, P.; Shaikly, V.; Taranissi, M.; Serhal, P.; Odia, R. A.; Vasilic, M.; Osnato, A.; Rugg-Gunn, P. J.; Vallier, L.; Hill, C. S.; Niakan, K. K.: Initiation and maintenance of the pluripotent epiblast in pre-implantation human development is independent of NODAL signaling. Developmental cell 60 (2), pp. 174 - 185 (2025)

Matsuda, M.; Lázaro, J.; Ebisuya, M.: Metabolic activities are selective modulators for individual segmentation clock processes. Nature communications 16 (1), 845 (2025)