Journal Article (2837)

361.
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Muhandes, L.; Chapsa, M.; Pippel, M.; Behrendt, R.; Ge, Y.; Dahl, A.; Yi, B.; Dalpke, A.; Winkler, S.; Hiller, M. et al.; Boutin, S.; Beissert, S.; Jessberger, R.; Fallon, P. G.; Roers, A.: Low threshold for cutaneous allergen sensitization but no spontaneous dermatitis or atopy in filaggrin-deficient mice. The Journal of investigative dermatology, doi: 10.1016/j.jid.2021.02.763, p. 1 - 1 (2021)
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Chamier, L. v.; Laine, R. F.; Jukkala, J.; Spahn, C.; Krentzel, D.; Nehme, E.; Lerche, M.; Hernández-Pérez, S.; Mattila, P. K.; Karinou, E. et al.; Holden, S.; Solak, A. C.; Krull, A.; Buchholz, T.-O.; Jones, M. L.; Royer, L.; Leterrier, C.; Shechtman, Y.; Jug, F.; Heilemann, M.; Jacquemet, G.; Henriques, R.: Democratising deep learning for microscopy with ZeroCostDL4Mic. Nature communications 12 (1), p. 2276 - 2276 (2021)
363.
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Don, F. K.; Huch, M.: Organoids, Where We Stand and Where We Go. Trends in molecular medicine 27 (5), pp. 416 - 418 (2021)
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Maddu, S.; Cheeseman, B.; Müller, C. L.; Sbalzarini, I. F.: Learning physically consistent differential equation models from data using group sparsity. Physical Review E 103 (4), 042310, p. 1 - 1 (2021)
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Arshadi, C.; Günther, U.; Eddison, M.; Harrington, K.; Ferreira, T. A.: SNT: a unifying toolbox for quantification of neuronal anatomy. Nature methods 18 (4), pp. 374 - 377 (2021)
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Evers, T. M. J.; Holt, L. J.; Alberti, S.; Mashaghi, A.: Reciprocal regulation of cellular mechanics and metabolism. Nature metabolism 3 (4), pp. 456 - 468 (2021)
367.
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Gupta, K.; Lalit, M.; Biswas, A.; Sanada, C. D.; Greene, C.; Hukari, K.; Maulik, U.; Bandyopadhyay, S.; Ramalingam, N.; Ahuja, G. et al.; Ghosh, A.; Sengupta, D.: Modeling expression ranks for noise-tolerant differential expression analysis of scRNA-seq data. Genome research 31 (4), pp. 689 - 697 (2021)
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Rhie, A.; McCarthy, S. A.; Fedrigo, O.; Damas, J.; Formenti, G.; Koren, S.; Uliano-Silva, M.; Chow, W.; Fungtammasan, A.; Kim, J. et al.; Lee, C.; Ko, B. J.; Chaisson, M.; Gedman, G. L.; Cantin, L. J.; Thibaud-Nissen, F.; Haggerty, L.; Bista, I.; Smith, M.; Haase, B.; Mountcastle, J.; Winkler, S.; Paez, S.; Howard, J.; Vernes, S.; Lama, T. M.; Grutzner, F.; Warren, W. C.; Balakrishnan, C. N.; Burt, D.; George, J. M.; Biegler, M. T.; Iorns, D.; Digby, A.; Eason, D.; Robertson, B.; Edwards, T.; Wilkinson, M.; Turner, G.; Meyer, A.; Kautt, A. F.; Franchini, P.; Detrich, H. W.; Svardal, H.; Wagner, M.; Naylor, G. J. P.; Pippel, M.; Malinsky, M.; Mooney, M.; Simbirsky, M.; Hannigan, B. T.; Pesout, T.; Houck, M.; Misuraca, A.; Kingan, S. B.; Hall, R. J.; Kronenberg, Z.; Sović, I.; Dunn, C.; Ning, Z.; Hastie, A. R.; Lee, J.; Selvaraj, S.; Green, R. E.; Putnam, N. H.; Gut, I.; Ghurye, J.; Garrison, E.; Sims, Y.; Collins, J.; Pelan, S.; Torrance, J.; Tracey, A.; Wood, J.; Dagnew, R. E.; Guan, D.; London, S. E.; Clayton, D. F.; Mello, C. V.; Friedrich, S. R.; Lovell, P. V.; Osipova, E.; Al-Ajli, F. O.; Secomandi, S.; Kim, H.; Theofanopoulou, C.; Hiller, M.; Zhou, Y.; Harris, R. S.; Makova, K. D.; Medvedev, P.; Hoffman, J.; Masterson, P.; Clark, K.; Martin, F.; Howe, K.; Flicek, P.; Walenz, B.; Kwak, W.; Clawson, H.; Diekhans, M.; Nassar, L.; Paten, B.; Kraus, R. H. S.; Crawford, A. J.; Gilbert, M. T. P.; Zhang, G.; Venkatesh, B.; Murphy, R. F.; Koepfli, K.-P.; Shapiro, B.; Johnson, W. E.; Palma, F. D.; Marques-Bonet, T.; Teeling, E.; Warnow, T.; Graves, J. M.; Ryder, O. A.; Haussler, D.; O'Brien, S. J.; Korlach, J.; Lewin, H. A.; Howe, K.; Myers, E. W.; Durbin, R.; Phillippy, A. M.; Jarvis, E. D.: Towards complete and error-free genome assemblies of all vertebrate species. Nature 592 (7856), pp. 737 - 746 (2021)
369.
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Spannl, S.; Buhl, T.; Nellas, I.; Zeidan, S. A.; Iyer, K. V.; Khaliullina, H.; Schultz, C.; Nadler, A.; Dye, N.; Eaton, S.: Glycolysis regulates Hedgehog signalling via the plasma membrane potential: Erratum ; Correction to EMBO J. 39 (2020) 21: e101767. The EMBO journal 40 (7), 107925 (2021)
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Durán, C.; Ciucci, S.; Palladini, A.; Ijaz, U. Z.; Zippo, A. G.; Sterbini, F. P.; Masucci, L.; Cammarota, G.; Ianiro, G.; Spuul, P. et al.; Schroeder, M.; Grill, S. W.; Parsons, B. N.; Pritchard, D. M.; Posteraro, B.; Sanguinetti, M.; Gasbarrini, G.; Gasbarrini, A.; Cannistraci, C. V.: Nonlinear machine learning pattern recognition and bacteria-metabolite multilayer network analysis of perturbed gastric microbiome. Nature communications 12 (1), 1926 (2021)
371.
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Dye, N.; Popovic, M.; Iyer, K. V.; Fuhrmann, J.; Piscitello-Gómez, R.; Eaton, S.; Jülicher, F.: Self-organized patterning of cell morphology via mechanosensitive feedback. eLife 10, e57964, p. 1 - 1 (2021)
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Iyer, K. V.; Taubenberger, A.; Zeidan, S. A.; Dye, N.; Eaton, S.; Jülicher, F.: Apico-basal cell compression regulates Lamin A/C levels in epithelial tissues. Nature communications 12 (1), 1756 (2021)
373.
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Squyres, G. R.; Holmes, M. J.; Barger, S. R.; Pennycook, B. R.; Ryan, J.; Yan, V. T.; Garner, E. C.: Single-molecule imaging reveals that Z-ring condensation is essential for cell division in Bacillus subtilis. Nature microbiology 6 (5), pp. 553 - 562 (2021)
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Schwich, O. D.; Blümel, N.; Keller, M.; Wegener, M.; Setty, S. T.; Brunstein, M. E.; Poser, I.; Mozos, I. R. D. L.; Suess, B.; Münch, C. et al.; McNicoll, F.; Zarnack, K.; Müller-McNicoll, M.: SRSF3 and SRSF7 modulate 3'UTR length through suppression or activation of proximal polyadenylation sites and regulation of CFIm levels. Genome biology 22 (1), 82 (2021)
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Popović, M.; Druelle, V.; Dye, N.; Jülicher, F.; Wyart, M.: Inferring the flow properties of epithelial tissues from their geometry. New Journal of Physics 23, 033004 (2021)
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Lackner, A.; Sehlke, R.; Garmhausen, M.; Stirparo, G. G.; Huth, M.; Titz-Teixeira, F.; Lelij, P. v. d.; Ramesmayer, J.; Thomas, H. F.; Ralser, M. et al.; Santini, L.; Galimberti, E.; Sarov, M.; Stewart, A. F.; Smith, A.; Beyer, A.; Leeb, M.: Cooperative genetic networks drive embryonic stem cell transition from naïve to formative pluripotency. The EMBO journal 40 (8), e105776 (2021)
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Bazan, R.; Schröfel, A.; Joachimiak, E.; Poprzeczko, M.; Pigino, G.; Wloga, D.: Ccdc113/Ccdc96 complex, a novel regulator of ciliary beating that connects radial spoke 3 to dynein g and the nexin link. PLoS genetics 17 (3), e1009388 (2021)
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Keenen, M. M.; Brown, D.; Brennan, L. D.; Renger, R.; Khoo, H.; Carlson, C. R.; Huang, B.; Grill, S. W.; Narlikar, G. J.; Redding, S.: HP1 proteins compact DNA into mechanically and positionally stable phase separated domains. eLife 10, e64563 (2021)
379.
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Dalton, B.; Sbalzarini, I. F.; Hanasaki, I.: Fundamentals of the logarithmic measure for revealing multimodal diffusion. Biophysical journal 120 (5), pp. 829 - 843 (2021)
380.
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Annabi, N.; Baker, M.; Boettiger, A.; Chakraborty, D.; Chen, Y.; Corbett, K. S.; Correia, B.; Dahlman, J.; Oliveira, T. d.; Ertuerk, A. et al.; Yanik, M. F.; Henaff, E.; Huch, M.; Iliev, I. D.; Jacobs, T.; Junca, H.; Keung, A.; Kolodkin-Gal, I.; Krishnaswamy, S.; Lancaster, M.; Macosko, E.; Martínez-Núñez, M. A.; Miura, K.; Molloy, J.; Cruz, A.; Platt, R. J.; Posey, A. D.; Shao, H.; Simunovic, M.; Slavov, N.; Takebe, T.; Vandenberghe, L. H.; Varshney, R. K.; Wang, J.: Voices of biotech research. Nature biotechnology 39 (3), pp. 281 - 286 (2021)
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